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Playlist

Next Generation Population Genomics for Nonmodel Taxa

In a population genomics workshop held July 23-24, 2013 at Cornell, instructors explore the strengths and weaknesses of different approaches to genome sequencing and bioinformatics when studying population genomics in nonmodel species. Go to the workshop website for information associated with these videos including lecture notes, descriptions of exercises, and computer code.

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1

Introduction to Population Genomics of Nonmodel Taxa

Added September 23, 2013

2

Signals of adaptation in genomes

Added September 23, 2013

3

Reduced representation strategies for genomic sampling

Added September 23, 2013

4

Low coverage sequencing for genomics of species barriers and traits

Added September 23, 2013

5

Transcriptomes for population genomics and expression analysis

Added September 23, 2013

6

Transcriptome de novo assembly - algorithms and pipelines

Added September 23, 2013

7

RAD/GBS clustering strategies

Added September 23, 2013

8

Probability basics for models of SNPs and genotypes

Added September 23, 2013

9

Models for allele frequencies from individual or population data

Added September 23, 2013

10

Genetic map-assisted analyses, Mendelian filtering

Added September 23, 2013

11

SNP/genotype calling and filtering

Added September 23, 2013

12

F-models for population differentiation

Added September 23, 2013

13

Models for ancestry and introgression in hybrid zones

Added September 23, 2013

14

Bayesian F-model exercise in JAGS

Added September 23, 2013

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